Thermo Fisher Scientific Axiom Maize6H Genotyping Array (60K), 384HT format

Applied Biosystems™ Axiom™ Maize6H Genotyping Array (60K), 384HT format

The Axiom Maize6H Genotyping Array (60K) is a component of the Axiom Genotyping Solution, in which target genomic DNA is prepared and processed on the GeneTitan Multi-Channel Instrument.
The automated process includes hybridization of genomic DNA to this high-throughput microarray, followed by staining, washing, imaging, and output of SNP genotyping data for further analysis.

This array was developed in collaboration with the Maize Research Center, Beijing Academy of Agriculture and Forestry Sciences, China, and is also available in mini-96 format (Cat. No. 551099).

Axiom Maize6H Genotyping Array (60K) Content

• Contains 61,282 markers evenly distributed across the maize genome
• 90% of content classified as high-performance markers (MAF and PIC > 0.2)
• Based on whole genome sequencing data of 388 representative maize inbred lines filtered for high SNP quality
• Includes 100 chloroplast loci

Applications

• Construction of DNA fingerprints and identification of similar maize varieties
• Gene mapping and genome-wide selection
• Molecular marker-assisted selection breeding
• Population genetics and evolutionary studies
• Evaluation of germplasm resources at the genomic level

Required Products

• GeneChip Command Console Software
• GeneTitan Multi-Channel Instrument
• Axiom Analysis Suite Software
• Axiom Long Format Export Tool (AxLE)

Reference

1. Tian, H.L., Yang, Y., Yi, H.M., Xu, L.W., He, H., Fan, Y.M., Wang, L., Ge, G.R., Liu, Y.W., Wang, F.G., & Zhao, J.R. (2021). New resources for genetic studies in maize (Zea mays L.): a genome-wide Maize6H-60K SNP array and its application. The Plant Journal, 105, 1113–1122.

Specifications